BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B10LP1|AL427580
(1026 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1427 0.0
3x_Contig1530 1186 0.0
>3x_Contig1461
Length = 5478
Score = 1427 bits (717), Expect = 0.0
Identities = 818/839 (97%), Gaps = 12/839 (1%)
Strand = Plus / Minus
Query: 45 cttatgacccactcggcaccttacgagaaatcaaagtctttgggttctggggggagtatg 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 cttatgacccactcggcaccttacgagaaatcaaagtctttgggttctggggggagtatg 921
Query: 105 gtcgcaaggctgaaacttaaaggaacttgacggaagggcaccaccaggagtggagcctgc 164
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 920 gtcgcaaggctgaaacttaaaggaa-ttgacggaagggcaccaccaggagtggagcctgc 862
Query: 165 ggcttamtttgactcaacacggggaaactcaccaggtccagacacaataaggattgacag 224
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ggcttaatttgactcaacacggggaaactcaccaggtccagacacaataaggattgacag 802
Query: 225 attgagagctctttcttgattttgtgggtggtggtgcatggccgttcttagttggtggag 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 attgagagctctttcttgattttgtgggtggtggtgcatggccgttcttagttggtggag 742
Query: 285 tgatttgtctgcttaattgcgataacgaacgagaccttaacctactaaatagggttgctg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgatttgtctgcttaattgcgataacgaacgagaccttaacctactaaatagggttgctg 682
Query: 345 gcacttgccggttgactcttcttagag-ggactatcggtttcaag-ccgatg-gaagttt 401
||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct: 681 gcacttgccggttgactcttcttagagaggactatcggtttcaagaccgatgagaagttt 622
Query: 402 gaggcaataacaggtctgtgatgcccttagacgttctgggccgcacgcgcgctacactga 461
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 621 gaggcaataacaggtctgtgatgcccttagacgttctgggccgcacgcacgctactgtga 562
Query: 462 cggagccagcgagtacaaccttggccgagaggtctgggtaatcttgtgawactccgtcgt 521
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 cggagccagcgagtacaaccttggccgagaggtctgggtaatcttgtgaaactccgtcgt 502
Query: 522 gctggggatagagcattgtwattattgctcttcaacgaggaattcctagtaagcgcaagt 581
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctggggatagagcattgtaattattgctcttcaacgaggaattcctagtaagcgcaagt 442
Query: 582 yatcagcttgcgttgattacgtccctgccctttgtacacaccgcccgtcgctagtaccga 641
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catcagcttgcgttgattacgtccctgccctttgtacacaccgcccgtcgctagtaccga 382
Query: 642 ttgawtggcttagtgaggcctcaggatttgcttagagaagggggcaactccatctcagag 701
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ttgaatggcttagtgaggcctcaggatttgcttagggaagggggcaactccatctcagag 322
Query: 702 cgaagaatctggtcaaac-ttggtcatttagaggaactaaaagtcgtaacaaggtttccg 760
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgaagaatctggtcaaacattggtcatttagaggaactaaaagtcgtaacaaggtttccg 262
Query: 761 tagttgaacctgcggaaggatcattaaagattatgaatgagtagattactgggggaatcg 820
|||| ||||||||||| |||||||||| ||| || ||||||||||| |||||||||||||
Sbjct: 261 tagt-gaacctgcgga-ggatcattaa-gat-at-aatgagtagat-actgggggaatcg 208
Query: 821 ctgaatatggcctgcgcttaattgcgcggctaattcttgattttctgct-atcagtttt 878
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 207 ctgaatatggcctgcgcttaattgcgcggctaattcttgattttctgctaatcagtttt 149
>3x_Contig1530
Length = 6216
Score = 1186 bits (596), Expect = 0.0
Identities = 880/972 (90%), Gaps = 5/972 (0%)
Strand = Plus / Plus
Query: 45 cttatgacccactcggcaccttacgagaaatcaaagtctttgggttctggggggagtatg 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cttatgacccactcggcaccttacgagaaatcaaagtctttgggttctggggggagtatg 757
Query: 105 gtcgcaaggctgaaa-cttaaaggaacttgacggaagggcaccaccaggagtggagcctg 163
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 758 gtcgcaaggctgaaaacttaaaggaa-ttgacggaagggcaccaccaggagtggagcctg 816
Query: 164 cggcttamtttgactcaacacggggaaactcaccaggtccagacacaataaggattgaca 223
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cggcttaatttgactcaacacggggaaactcaccaggtccagacacaataaggattgaca 876
Query: 224 gattgagagctctttcttgattttgtgggtggtggtgcatggccgttcttagttggtgga 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gattgagagctctttcttgattttgtgggtggtggtgcatggccgttcttagttggtgga 936
Query: 284 gtgatttgtctgcttaattgcgataacgaacgagaccttaacctactaaatagggttgct 343
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 937 gtgatttgtctgcttaattgcgataacgaacgagaccttaacctactaaataaagttgct 996
Query: 344 ggcacttgccggttgactcttcttagagggactatcggtttcaagccgatggaagtttga 403
|||||| || ||| |||||||||| | |||||| ||||||||| || || ||| |
Sbjct: 997 agcacttcccagttaactcttcttaaaaatactatcattttcaagccaataaaattttaa 1056
Query: 404 ggcaataacaggtctgtgatgcccttagacgttctgggccgcacgcgcgctacactgacg 463
||||||||| ||| | ||||||||| |||||||| ||| ||||||||||||||| ||
Sbjct: 1057 agcaataacacatctataatgcccttaaacgttctgtgccccacgcgcgctacactaaca 1116
Query: 464 gagccagcgagtacaaccttggccgagaggtctgggtaatcttgtgawactccgtcgtgc 523
|||||||| ||||||||||| ||| | | ||| ||||||| | | ||||| ||||||
Sbjct: 1117 gagccagcaagtacaaccttagccaaaaattctatttaatcttttaaaactccttcgtgc 1176
Query: 524 tggggatagagcattgtwattattgctcttcaacgaggaattcctagtaagcgcaagtya 583
|| |||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1177 tgaaaatagagcattgtaattattgctcttcaacgaggaattcctagtaagcgcaattca 1236
Query: 584 tcagcttgcgttgattacgtccctgccctttgtacacaccgcccgtcgctagtaccgatt 643
||||||||| || ||||| ||||| |||||| |||||||||||| |||||| |||| |||
Sbjct: 1237 tcagcttgcttttattacttcccttccctttttacacaccgcccttcgctattacctatt 1296
Query: 644 gawtggcttagtgaggcctcaggatttgcttagagaagggggcaactccatctcagagcg 703
| | ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1297 taatcgcttattgacgcctcactatttgcttagagaagggggcaactccatctcagagcg 1356
Query: 704 aagaatctggtcaaacttggtcatttagaggaactaaaagtcgtaacaaggtttccgtag 763
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1357 aaaaatctggtcaaacttggtcatttagaggaactaaaattcgtaacaaggtttccgtag 1416
Query: 764 ttgaacctgcggaaggatcattaaagattatgaatgagtagattactgggggaatcgctg 823
||||||||||||| ||||||||| ||||| ||| |||| ||||||||||||||||||
Sbjct: 1417 -tgaacctgcggaactatcattaaatattataaataagtaaattactgggggaatcgcta 1475
Query: 824 aatatggcctgcgcttaattgcgcggctaattcttgattttctgctatcagttttctttc 883
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1476 aatatcgcctgcgcttaattgcgcggctaattcttaattttctgctatcaattttctttc 1535
Query: 884 tctcatcctaaacacaatggagttttttctctatgaactacttccctggagagctcgtct 943
|||||||||||||||||| | |||||||||||| |||||||||||| | ||||| |||
Sbjct: 1536 tctcatcctaaacacaataaatttttttctctataaactacttccctaaaaagctcttct 1595
Query: 944 ctccagtggacataaacacaaacaacattttgcattat-gaaaactatttatcaagaaa- 1001
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1596 ctccagttaacataaacacaaacaacattttgcattatcaaaaactatttatcaataaat 1655
Query: 1002 ttwatattcaaa 1013
|| |||||||||
Sbjct: 1656 ttaatattcaaa 1667
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4873
Number of Sequences: 1807
Number of extensions: 4873
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 1026
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1010
effective length of database: 10,329,639
effective search space: 10432935390
effective search space used: 10432935390
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)